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Clemson Bioinformatics News:
| 10/18/2006: |
Bioinformatics Research Symposium
- Sponsored by the SC-INBRE Bioinformatics Core
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Clemson University, January 18 - 19, 2007
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Keynote Speakers:
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Prof. Diana Murray (Weill Medical College of Cornell University)
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Dr. Anna Panchenko (NCBI, Computational Biology Branch)
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Selected Talks, Poster Presentations:
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Abstract submission deadline November 17, 2006
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Registration deadline December 15, 2006
Registration at:
http://www.scinbre.org/program/3rd_SCINBRE_Bioinformatics_Research_Symposium/home.html
E-mail: pierre@biol.sc.edu for more information
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| 09/11/2006: |
The SC INBRE Bioinformatics Workshop
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The SC INBRE Bioinformatics Core is pleased to announce the first
bioinformatics workshop of the year 2006/2007.
The workshop will focus on the software Artemis, developed by the
Pathogen Sequencing Unit of the Sanger Institute (UK)
This free software can be run on UNIX/Linux, Macintosh and Windows.
The workshop will address the following issues:
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Installation of the software;
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How to read GenBank, EMBL, FASTA files;
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Display of DNA/protein sequence;
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Display of annotation features associated to a DNA sequence;
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How to map Blast output onto a DNA sequence;
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Use of Blast command lines;
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How to extract annotation features from annotation files;
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How to generate a gene database;
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How to generate a table from an annotation file;
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How to find a motif within a sequence;
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How to generate EMBL files;
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How to generate an automatic annotation.
The workshop will be held at Clemson University.
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There will be a
powerpoint presentation of the software on Thursday October 19 (2-5pm)
in the Kinard building (room 201)
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and a hands-on session on Friday
October 20
(10am-1pm) in the Kinard building (room 221).
Please register as soon as possible to pierre@biol.sc.edu.
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